MOMD: Mouse Oral Microbiome Database

MOMD Genome Explorer

Selected genome: Escherichia coli 19428wD4_HM13

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from a total of 52 genomes

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PROKKA Genome Annotation:

contigs: 110

bases: 5,033,648 bps

CDS: 4,645

rRNA: 10

Repeat region:

tmRNA: 1

tRNA: 79

misc RNA:

Total features: 4,735

Total number of protein coding genes annotated/found: 4,645

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Molecule ^	PID/GenBank ID *^	Sequences	Size (NA/AA)	Range ^	Gene Product Name
SEQF5033\|JADGMH010000002.1	SEQF5033_02216	NA AA	90/30	95562-95473	hypothetical protein
SEQF5033\|JADGMH010000033.1	SEQF5033_02601	NA AA	90/30	2016-1927	hypothetical protein
SEQF5033\|JADGMH010000003.1	SEQF5033_02804	NA AA	90/30	111886-111797	putative protein YnhF
SEQF5033\|JADGMH010000009.1	SEQF5033_04610	NA AA	90/30	59090-59001	hypothetical protein
SEQF5033\|JADGMH010000010.1	SEQF5033_00109	NA AA	93/31	132262-132354	Putative cytochrome bd-II ubiquinol oxidase subunit AppX
SEQF5033\|JADGMH010000016.1	SEQF5033_00815	NA AA	96/32	88307-88402	hypothetical protein
SEQF5033\|JADGMH010000018.1	SEQF5033_00994	NA AA	96/32	54374-54279	hypothetical protein
SEQF5033\|JADGMH010000003.1	SEQF5033_02717	NA AA	96/32	23134-23229	Small protein MgtS
SEQF5033\|JADGMH010000006.1	SEQF5033_03832	NA AA	96/32	64-159	hypothetical protein
SEQF5033\|JADGMH010000002.1	SEQF5033_02521	NA AA	99/33	430059-429961	hypothetical protein
SEQF5033\|JADGMH010000001.1	SEQF5033_01213	NA AA	102/34	91654-91755	hypothetical protein
SEQF5033\|JADGMH010000001.1	SEQF5033_01232	NA AA	102/34	113265-113164	putative membrane protein YkgR
SEQF5033\|JADGMH010000028.1	SEQF5033_02107	NA AA	102/34	30053-30154	hypothetical protein
SEQF5033\|JADGMH010000013.1	SEQF5033_00423	NA AA	108/36	32756-32649	Small toxic polypeptide LdrD
SEQF5033\|JADGMH010000001.1	SEQF5033_01595	NA AA	108/36	506200-506093	Protein YbgU
SEQF5033\|JADGMH010000002.1	SEQF5033_02226	NA AA	108/36	107058-107165	hypothetical protein
SEQF5033\|JADGMH010000003.1	SEQF5033_02868	NA AA	108/36	178464-178571	putative protein YniD
SEQF5033\|JADGMH010000006.1	SEQF5033_03936	NA AA	108/36	123420-123313	putative protein YqcG
SEQF5033\|JADGMH010000021.1	SEQF5033_01768	NA AA	111/37	73014-73124	putative protein YshB
SEQF5033\|JADGMH010000003.1	SEQF5033_03096	NA AA	111/37	398290-398180	hypothetical protein

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Page last updated: July 7, 2021 08:39:35